Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQGFYKDQKLHLLEDPMQQYTVMKVEENAVCVYRWIDDYRHKIERFTDVEEAKKLLGEGWPKQ
2KPQ Chain:A ((20-45))-----------------------------------SLQN--GAPRIFNGVYEAFDFLQHEWPA-


General information:
TITO was launched using:
RESULT:

Template: 2KPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 29 1084 37.38 41.69
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 37.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.712

(partial model without unconserved sides chains):
PDB file : Tito_2KPQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KPQ-query.scw
PDB file : Tito_Scwrl_2KPQ.pdb: