Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMISFIFAMDANRLIGKDNDLPWHLPNDLAYFKKITSGHSIIMGRKTFESIGRPLPNRKNIVVTSAPDSEFQGCTVVSSLKDVLDICSGPEECFVIGGAQLYTDLFPYADRLYMTKIHHEFEGDRHFPEFDESNWKLVSSEQGTKDEKNPYDYEFLMYEKKNSSKAGGF
2KGK Chain:A ((2-162))IVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKNPYTYYYHVYEKQQ-------


General information:
TITO was launched using:
RESULT:

Template: 2KGK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 732 -85432 -116.71 -530.63
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -116.71
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_2KGK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2KGK-query.scw
PDB file : Tito_Scwrl_2KGK.pdb: