Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKLDLQPSEKLFIPFITAGDPVPEVSIELAKSLQKAGATALELGVAYSDPLADGPVIQRASKRALDQGMNIVKAIELGGEMKKNGVNIPIILFTYYNPVLQLNKEYFFALLRENHIDGLLVPDLPLEESNSLQEECKSHEVTYISLVAPT-SESRLKTIIEQAEGFVYCVSSLGVTGVRNEFNSSVYPFIRTVKNLSTVPVAVGFGISNREQVIKMNEI-SDGVVVGSALVRKIEELKDRLISAETRNQALQEFEDYAMAFSGLYSLK
1RD5 Chain:A ((20-254))------------FIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRS----LAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGE-------AASPKQGLRRLEEYA----------


General information:
TITO was launched using:
RESULT:

Template: 1RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1235 -103130 -83.51 -442.62
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -83.51
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_1RD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RD5-query.scw
PDB file : Tito_Scwrl_1RD5.pdb: