Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKKVIGILVIIAIISVGFFQKEAWLDAIKAGGMFSVLFSMLLIAADVFFPIVPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARYSFRDWARKKVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFFFASLIGKIPNIVVVTIAGANFTSNKLLSISIYGTYILIIMLVIYKKFPHLLKVPKK
5CK4 Chain:A ((164-244))-------------------------------------------------------AVIFLLDAAALADSDGDYLSQTASYLYDVLLSLQKRFH----SRKNSRAPSSIPVLIAANKQDLFTAV-------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 144 -25496 -177.06 -398.38
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.47

3D Compatibility (PKB) : -177.06
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.072

(partial model without unconserved sides chains):
PDB file : Tito_5CK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CK4-query.scw
PDB file : Tito_Scwrl_5CK4.pdb: