Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIFSLALISLFAVILLAACGSKGSNGEASKESKKDTLAAIKDNDKIVFGVKTDTRLFGLKNPSSGEIEGFDIDIAKQIAKDILGDEKKAQFKEVTSKTRIPMLQNGDIDAIVATMTITEERKKEVDFSDVYFEAGQSLLVKKGS-KIKSVENLGKGSKVLAVKGSTSSQNIREKAPEAS--VLEFENYAEAFTALKSGQGDALTTDNAILYGMADENKN--YQLTGKPFTDEPYGIAVKKGQSALAKEINASLKKMKSDGRYDEIYKKWIKEDPAE
4ZV1 Chain:A ((23-232))----------------------------------------------------------FGFKD-ENGKLVGFDIDLAKAIAKK-LG--VKVEFKPMDFDGIIPALQSGKIDVVIAGMTITEERKKQVDFSDPYFEAGQAIVVKKGNDSIKSLEDL-KGKKVGVQLGSTSEQHVKKVAKDAGVKVKKFDNFSEAFQELKSGRVDAVVTDNAVALAYVKQNPNAGVKIVGETFSGEPYGIAVRKGNSELLEKINKALEEMKKDGTYDKIYEKWFG-----


General information:
TITO was launched using:
RESULT:

Template: 4ZV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 983 34658 35.26 169.06
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : 35.26
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_4ZV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZV1-query.scw
PDB file : Tito_Scwrl_4ZV1.pdb: