Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPIGRSLQGVTGRPDFQKRLEQMKEKVMKDQDVQAFLKENEEVIDQKMIEKSLNKLYEYIEQSKNCSYCSEDENCNNLLEGYHPKLVVNGRSIDIEYYECPVKRKLDQQKKQQSLMKSMYIQQDLLGATFQQVDISDPSRLAMFQHVTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEKEYSSMIVYVPEFVRELKNSLQDQTLEEKLNMVKTTPVLMLDDIGAESMTSWVRDEVIGTVLQHRMSQQLPTFFSSNFSPDELKHHFTYSQRGEKEEVKAARLMERILYLAAPIRLDGENRRHP
2W58 Chain:A ((4-202))--------------------------------------------------------------------------------------------------------------KRQESLIQSMFMPREILRASLSDVDLNDDGRIKAIRFAERFVAEYEPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVPELFRELKHS---QTMNEKLDYIKKVPVLMLDDLGAE---SWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHHLTYSQ-----KVKAARIMERIRYLAYPIEITGPNRR--


General information:
TITO was launched using:
RESULT:

Template: 2W58.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 887 -126821 -142.98 -674.58
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -142.98
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_2W58.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W58-query.scw
PDB file : Tito_Scwrl_2W58.pdb: