Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASFQSFGIPGQLEVIKKALDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEIEDKTYFVGIQNDITKQKEYEKLLEDSLTEITALSTPIVPIRNGISALPLVGNLTEERFNSIVCTLTNILSTSKDDYLIIDLSGLAQVNEQTADQIFKLSHLLKLTGTELIITGIKPELAMKMNKLDANFSSLKTYSNVKDAVKVLPIM
2PR5 Chain:A ((6-132))--------------------DHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYKKDGTMFWNELNIDPMEIEDKTYFVGIQNDITKQKEYEKLLEDSLTEITALS------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2PR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 482 -30374 -63.02 -239.17
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -63.02
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.642

(partial model without unconserved sides chains):
PDB file : Tito_2PR5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PR5-query.scw
PDB file : Tito_Scwrl_2PR5.pdb: