Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGMPVEFNTLIVTKGKEVRI-DENIFTLEKDG---YRVYPMEIPMDVRKTKFGEKSGTAEVQKLQWEEGRTIITYKLTSLHSVN
2BNE Chain:A ((195-237))---------------KELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGT--------------------------


General information:
TITO was launched using:
RESULT:

Template: 2BNE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 45 5291 117.57 135.65
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 117.57
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_2BNE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BNE-query.scw
PDB file : Tito_Scwrl_2BNE.pdb: