Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKKLKESGWIE
4JZV Chain:A ((1-158))MYEFKDYYQNTVQLSFDDQPFSDSPKHVWVICRFGGKWLLTEHEDRGYEFPGGKVEPMECAEEAALREVKEETGARVKSLKYLGQYKVLGKEKVIVKNIYFADIEKLEKQADYFETKGPVLFHELPENLSRNKKFSFIMKDSVLPISLKKLKESGWIE


General information:
TITO was launched using:
RESULT:

Template: 4JZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 784 -63828 -81.41 -403.97
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 1.00

3D Compatibility (PKB) : -81.41
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 1.00
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4JZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JZV-query.scw
PDB file : Tito_Scwrl_4JZV.pdb: