Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWKRMTAKAEGLYIADTKSFVTKQMDKLDFDYGGIPGDLHFGLTKKAGAREPMFSRGTEIFNRRQISIVSIEECNEIALKMGVPRILPEWLGANVAVSGMPDLTSLKEGSRIIFPSGAALLCEGENDPCIQPGEVIQSYYPDQPKLASAFVRHALGIRGIVCIVERPGAVYTGDEIEVHSYQRKVKRKAERV
4NDF Chain:A ((89-177))----------GYHAIPSMSHVHLHVISQDFDSPCLKNKKHWN------------SFNTEYFLESQAVIEMVQEAGRVTVRDGMPELLKLPLRCHECQQLLPSIPQLKEHLR---------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 253 -16458 -65.05 -184.92
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -65.05
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.018

(partial model without unconserved sides chains):
PDB file : Tito_4NDF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NDF-query.scw
PDB file : Tito_Scwrl_4NDF.pdb: