Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMLLFLIIAAVSMLTIAGCSSQSSSADGKVTLKFFHRWPKEPEKSYFEEVVKEFEKDHPDIDIQIEAVLNDSYKDKIK-VMLGTTSPPDIYFSWSDEFAFKFIRGNKALDLSSYYKNDTDWSSQLVQSQITPFTYENKQYGVPWQMDAKSFFYNKDIFQKLNL-DPPKTWDELIDVSKKLKEHGYTPISFGTKATWTISHYIGTLNQRMVDEKTREKDYNAKTGEFTDEGYVKALEKLQEL--MPYFNKHVNSVDHEYVRQQFKSGKSAMIYAETAEIKLV---EP-------------VNLGMFPFPEISGQKGSSEALTGAPEGFMISSRTKHPKEAMEFLQFLTSKRMGEKLVKDVGKYSAVQGTATEENATAIQREAVQHIVD----AKSMVPWFDMDVDVEVADAYLTGVQQMLGGDMTPQQVMKAVQKAAKQVRASAE
3ZKL Chain:A ((18-412))----------------------------DDK-TITFWHNASAGEGRQYWENLAKSFEEANPGTKVEIQAIQNEDFAGKLQTAMQDPASGPDVFMSLGGAKTKEMIDAGQVMDLTDKI---SDTVKTDMKTTLSAATFDGKVYGVPVSVEPGGMWYSKDLFKKAGVSDVPATYEELLADAKKLKDSGTDAIALGAKDAWPAAHWYYWLVLRECSPEVYDK--SVQDHDFSNACWVNAGKKLQELKDLKVFNDGFLTT----TAQQGANSSAGLLANHKAAMELMGAWEPGVLKDLTPDQKPMADLGFFAFPEVAGGEGEPGALMGGVTYFCVNPKAS--QTSIDFVNYMGEKKNQEDYAK---AFSTI--PASEPARAVVTDESLKQVIEYLDKAPSMQLWMDTALGTNIGNALNAAVVNMLSGQGSPEDIVKAMQDAAQK------


General information:
TITO was launched using:
RESULT:

Template: 3ZKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2139 77167 36.08 208.00
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 36.08
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_3ZKL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZKL-query.scw
PDB file : Tito_Scwrl_3ZKL.pdb: