Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNENMSFKELYAIVRHRFVLILLITIGVTLIMGFVQFKVISPTYQASTQVLVHESDGEENSNLSDIQRNLQYSSTFQSIMKSTALMEEVKAELHLSESASSLKGKVVTSSENESEIINVAVQDHDPAKAAEIANTLVNKFEKEVDERMNVQGVHILSEAKASESPMIKPARLRNMVMAFGAAVMGGITLAFFLHFLDDTCKSARQLSERTGLPCLGSVPDVHKGRNRGIKHFGE
4Q6N Chain:A ((89-187))--------------------------------------------------------GDMNRKFAALDKNDPEYPTIQEI-KSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLA--FANNTIESINAHLLHPIEE----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4Q6N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 205 -4496 -21.93 -45.41
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -21.93
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.188

(partial model without unconserved sides chains):
PDB file : Tito_4Q6N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q6N-query.scw
PDB file : Tito_Scwrl_4Q6N.pdb: