Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAFTLYPAIDMRNGKCVRLVQGDYNKETIYGDSPYDMAELFEKEGAEWIHLVDLDGAKEGKRVNDRHVIEIAQKLNLKVEIGGGIRSENDVYEYLSAGVERVILGSSAVSNPPFVKKMLKQYGEKIAIGLDARNGFVSTEGWLETSTLKATELGKELANEGAEVFIFTDIATDGMLSGPNVKSTVELAKETGKSVIASGGVSSVADLEALARNEADGVSGAIIGKALYTNQFTLSEALERVKRK
2X30 Chain:A ((1-237))MSKLELLPAVDVRDGQAVRLVHGESGTETSYG-SPLEAALAWQRSGAEWLHLVDLDAAF-GTGDNRALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGNGWTRDGG-DLYETLDRLNKEGCARYVVTDIA-------PNLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALE-----


General information:
TITO was launched using:
RESULT:

Template: 2X30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1279 -113897 -89.05 -495.20
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -89.05
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.645

(partial model without unconserved sides chains):
PDB file : Tito_2X30.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2X30-query.scw
PDB file : Tito_Scwrl_2X30.pdb: