Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKRFSLIMMTGLLFGLTSPAFAAEKTETEAKAPANVAVLLDASGSMAKRIDGVSKFNSAKKEISKFASSLPEGTQVKMSVFGSEGNNKNS-GKVQSCEAIRNVYGFQSF-NEQSFLNSLNTIGPT--GWTPIAKALNEAK-SSFDQLDAKG----EKVVYLLTDGEETCGGNPIKTAKELQKDNITVNVIGFDYKEGYKGQLNAIAKVGGGEYFPAYTQKDVEKIFTQQSLMLSK
4CN8 Chain:A ((46-206))--------------------------DAEECDVQADIIVLFDDSSSI--QYDNKENYQMMKDFVKELVDSF--------TTVGV----GSQFGVVQFSQGVKTAFPLNKFKTKEDIKKGIQDMVPRNGGQTEIGTGLKHVRENSFSGAEGGGNPDKQKIVILMTDGKSNAGAPPQHEAHKLKAEGVTVIAIGI-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CN8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 42788 59.10 297.14
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 59.10
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.539

(partial model without unconserved sides chains):
PDB file : Tito_4CN8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CN8-query.scw
PDB file : Tito_Scwrl_4CN8.pdb: