Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRTEKEKMAAGELYNSEDQQLLLERKHARQLIRQYNETPEDDA-VRTKLLKELLGSVGDQVTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARILKQL
2P2O Chain:A ((2-184))--KSEKEKMLAGHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLFIEPNFRCDYGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGDNAVIASGAVVTKDVPANAVVGGNPAKVIKWL


General information:
TITO was launched using:
RESULT:

Template: 2P2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 948 -43577 -45.97 -239.43
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.91

3D Compatibility (PKB) : -45.97
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.623

(partial model without unconserved sides chains):
PDB file : Tito_2P2O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2P2O-query.scw
PDB file : Tito_Scwrl_2P2O.pdb: