Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLAGVLCMCAAAASALFGSWSLCHTPTADPTALALRAMAPTQLAAAVM------------------------LAAGGVVAVAAPGHTALMVVIVCIAG----AVGTLAAGSWQSAQYALRRETASPTANCVGSCAVCTQACH
1QOR Chain:A ((88-192))
-------------AQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQVINY-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31798 for 440 contacts (-72.3/contact) +
2D Compatibility (PS) -7973 + (NN) -498 + (LL) 3288
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -39531.0 ( -89.84 by residue)
QMean score : -0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1QOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QOR-query.scw
PDB file :
Tito_Scwrl_1QOR.pdb
: