Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVVRSIGKKMQRISGPNALAVKGRPTQVYGHTHVRLDCRFMADSEFTAPEVTQLAEGLHRALSKLISMLRRGDPNGAAAGDLTLAQLSILVTLLDQGPIRMTDLAAHERVRTPTTTVAIRRLEKIGLVKRSRDPSDLRAVLVDITPQGRAVHGESLANRRAALAALLSQLPRSDLETLRKALAPLERLASGEPASGPASNSPARKRA
2ETH Chain:A ((18-142))
----------------------------------------------------------IFKTLFSLVMRFSSYLPSNEEISDMKTTELYAFLYVALFGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYRVVLTEKGKEIFGEILSNFESLLKSVLEKFSEEDFKVVSEGF-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ETH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39794 for 766 contacts (-52.0/contact) +
2D Compatibility (PS) -13624 + (NN) -8248 + (LL) 4572
1D Compatibility (HY) -7200 + (ID) 1550
Total energy: -65844.0 ( -85.96 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_2ETH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ETH-query.scw
PDB file :
Tito_Scwrl_2ETH.pdb
: