Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSDDELTGLDEFALLAENAEQAGVNGPLPEVERVQAGAIS-ALRWGGSAPRVIFLHGGGQNAHTWDTVIVGLGE--PALAVDLPGHGHSAWREDGNYSPQLNSETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRDVKSLRRGVFHNSRRLDNG------NWVWRYDAIRTFGDFAGLWDDVDALSAPITLVRGGSSGFVTDQDTAELHRRATHFRGVHIVEKSGHSVQSDQPRALIEIVRGVLDTR |
3KXP Chain:A ((52-313)) | ---------------------------------RVDIGRITLNVREKGSGPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKPETG-YEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTP-----YIETEALDALEARVNAGSQLFEDIKAVEAYLAGRYPNIPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDV---TKPVLIVRGESSKLVSAAALAKTSRLRPDL-PVVVVPGADHYVNEVSPEITLKAITNFID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169794 for 2177 contacts (-78.0/contact) +
2D Compatibility (PS) -27224 + (NN) -10540 + (LL) 2868
1D Compatibility (HY) -11600 + (ID) 3550
Total energy: -219840.0 ( -100.98 by residue)
QMean score : 0.483
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