Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFAALRDMQWRKRRLVITIISTGLIFGMTLVLTGLANGFRVEARHTVDSMGVDVFVVRSGAAGPFLGSIPFPDVDLARVAAEPGVMAAAPLGSVGTIMKEGTSTRNVTVFGAPEHGPGMPRVSEGRSPSKPDEVAASSTMGRHLGDTVEVGARRLRVVGIVPNSTALAKIPNVFLTTEGLQKLAYNGQPNITSIGIIGMPRQLPEGYQTFDRVGAVNDLVRPLKVAVNSISIVAVLLWIVAVLIVGSVVYLSALERLRDFAVFKAIGTPTRSIMAGLALQALV--IALLAAVVGVVLAQVLAPLFPMIVAVPVGAYL-----ALPVAAIVIGLFASVAGLKRVVTVDPAQAFGGP |
| 4Z3N Chain:A ((324-393)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GNVTRTLNAYWAAVALAFSIVLVLAVMHIVLAPWMYPLFTRVVAVSDYAVLQTRIMALALPFVAISLLAS------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39928 for 316 contacts (-126.4/contact) +
2D Compatibility (PS) -6469 + (NN) -2980 + (LL) 19508
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -39269.0 ( -124.27 by residue)
QMean score : 0.148
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