Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA |
3K2T Chain:A ((26-54)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GHSFYVYTDAETNGTNIVYSRKDGKYGLI------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3K2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10044 for 118 contacts (-85.1/contact) +
2D Compatibility (PS) -3133 + (NN) -2489 + (LL) 15048
1D Compatibility (HY) -3200 + (ID) 650
Total energy: -4468.0 ( -37.86 by residue)
QMean score : 0.710
|
|
|