Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEVFDALDADLDRLDEVSFEVLSTP--ERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP
2Q2T Chain:A ((29-94))
-----------------------------------------------------LAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSVMNRLLTELLPEGSDGEISIEGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q2T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5130 for 290 contacts (-17.7/contact) +
2D Compatibility (PS) -6170 + (NN) 3803 + (LL) 5444
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -8153.0 ( -28.11 by residue)
QMean score : 0.059
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2T-query.scw
PDB file :
Tito_Scwrl_2Q2T.pdb
: