Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTID----------PSDLQFNGAEVDITDWCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPHAKIIVAGSSAEYGFVDPSEVPINERRELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVARIFNCTGP--------RKVGDALSDFVRRCTWLEHHPEQSAIRVGNLKTKRTIVDVRDLNRALMLMLDKGEAGADYNVGGSIAYEMGDVLKQVIAACKRD--DIVPEVDPALLRPTDEKIIYGDCSKLAAITGWQQEICLTQTIADMFDYWRSKSESALMV |
1RPN Chain:A ((19-326)) | ----VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDG--DMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQ--DENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARI--------KLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD-DYVVATGVTTTVRDMCQIAFEHVGLDYRDFL-KIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRTSLDELIRMMVE------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182230 for 2586 contacts (-70.5/contact) +
2D Compatibility (PS) -30287 + (NN) -11799 + (LL) 3072
1D Compatibility (HY) -19600 + (ID) 4400
Total energy: -245244.0 ( -94.84 by residue)
QMean score : 0.510
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