Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCTARTAEEIFVETIAVKTRILNDRVLLEAARAIGDRLIAGYRAGARVFMCGNGGSAADAQHFAAELTGHLIFDRPPLGAEALHANSSHLTAVANDYDYDTVFARALEGSARPGDTLFAISTSGNSMSVLRAAKTARELGVTVVAMTGESGGQLAEFADFLINVPSRDTGRIQESHIVFIHAISEHVEHALFAPRQ
2XBL Chain:A ((20-197))
----------------VMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFGK--
General information:
TITO was launched using:
RESULT:
Template:
2XBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129191 for 1510 contacts (-85.6/contact) +
2D Compatibility (PS) -19755 + (NN) -10304 + (LL) 2216
1D Compatibility (HY) -16800 + (ID) 3900
Total energy: -177734.0 ( -117.70 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_2XBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XBL-query.scw
PDB file :
Tito_Scwrl_2XBL.pdb
: