Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNSRRRSLRWSWLLSVLAAVGLGLATAPAQAAPPALSQDRFADFPALPLDPSAMVAQVGPQVVNINTKLGYNNAVGAGTGIVIDPNGVVLTNNHVIAGATD--INAFSVGSGQTYGVDVVGYDRTQDVAVLQLRGAGGLPSAAIGGG--VAVGEPVVAMGNSGGQGGTPRAVPGRVVALGQTVQASDSLTGAEETLNGLIQFDAAIQPGDSGGPVVNGLGQVVGMNTAA---SDNFQLSQGGQGFAIPIGQAMAIAGQIRSGGGSPTVHIGPTAFLGLGVV-DNNGNGARVQRVVGSAPAASLGISTGDVITAVDGAPINSATAMADALNGHHPGDVISVTWQTKSGGTRTGNVTLAEGPPA |
| 2Z9I Chain:A ((11-311)) | ------------------------------------------------------VAAKVVPSVVMLETDL----E--EGSGIILSAEGLILTNNHVIAAAAKPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGT--VTTGIVSALNRPVST--------NTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATL----QSGSIGLGFAIPVDQAKRIADELISTGKAS--H----ASLGVQVTNDK-TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169101 for 2370 contacts (-71.4/contact) +
2D Compatibility (PS) -29658 + (NN) -17385 + (LL) 3348
1D Compatibility (HY) -19600 + (ID) 5950
Total energy: -238346.0 ( -100.57 by residue)
QMean score : 0.470
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