Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAATDTFGNYRERHDRLIEAIVLIRQLWSGER-ISFTGHYFRTDELKLYDTPAMPPPIFVAASGPQSATLAGRYGDGWIAQARDINDAK--LLAAFAAGAQAAGRDPTTLGKRAELFAVVGDDKAAARAADLWRFTAGAV-------DQPNPVEIQRAAESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPF-LHFPQDDPITAIDFYRTNVLPELR |
| 1RHC Chain:A ((5-329)) | -------------------------------------------IGYFASLEQYRPMDALEQAIRAEKVGFDSVWVDDHFHPWYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTGEWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMGPKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPD--YDKAVEALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEAGINHFCLGNSSPDVNFGIDIFK-EVIPAVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180646 for 2730 contacts (-66.2/contact) +
2D Compatibility (PS) -34465 + (NN) -22657 + (LL) 296
1D Compatibility (HY) -19600 + (ID) 5150
Total energy: -262222.0 ( -96.05 by residue)
QMean score : 0.528
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