Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEVVTAAPAPPVVRLPPAVRGPKLFQGLAFVVSRRRLLGRFVRRYGKAFTANILMYGRVVVVADPQLA-RQVFTSSPEELGNIQPNLSR-MFGSGSVFALDGDDHRRRRRLLAPPFHGKSMKNYETIIEEETLRETANWPQGQAFATLPSMMHITLNAILRAIFGAGGSELDELRRLIPPWV-TLGSRLAALPKPKRDYGRLSPWGRLAEWRRQYDTVIDKLIEAERADPNFADRTDVLALMLRSTYDDGSIMSRKDIGDELLTLLAAGHETTAATLGWAFERLSRHPDVLAALVEEVDNGGHELRQAAILEVQRARTVIDFAAR---RVNPPV----------YQLGEWVIPRGYSIIINIAQIHGDPDVFPQPDRFDPQRYI----GSKPSPFAWIPFGGGTRRCVGAAFANMEMDVVLRTVLRHFTLETTTAAGERSHGRGVAFTPKDGGRVVMRRR |
| 2VE4 Chain:A ((41-412)) | -------------------------------------------QQFGPIFKTR--LFGKNVIFISGALANRFLFTKEQETFQATWPLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEKVSQNPQLF----PWFETYIQGLFSLPIPLPN----TLFGKSQRARALLLAELEKIIKARQQQP--PSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK--LQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQF-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165683 for 2613 contacts (-63.4/contact) +
2D Compatibility (PS) -38920 + (NN) -25274 + (LL) 5488
1D Compatibility (HY) -21200 + (ID) 4900
Total energy: -250489.0 ( -95.86 by residue)
QMean score : 0.426
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