Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLALWSRPVWDVEPWDRWLRDFFGPAATTDWYRPVAGDFTPAAEIVKDGDDAVVRLELPGIDVDKDVNVELDPGQPVSRLVIRGEHRDEHTQDAGDKDGRTLREIRYGSFRRSFRLPAHVTSEAIAASYDAGVLTVRVAGAYKAPAETQAQRIAITK
3GT6 Chain:A ((39-133))
-------------------------------------TAQWVPRVDIKEEVNHFVLYADLPGIDPSQ-IEVQMDKGI----LSIRGERKSESSTET-ERFSRIER--RYGSFHRRFALPDSADADGITAAGRNGVLEIRI-------------------
General information:
TITO was launched using:
RESULT:
Template:
3GT6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55393 for 627 contacts (-88.3/contact) +
2D Compatibility (PS) -10058 + (NN) -4865 + (LL) 4176
1D Compatibility (HY) -5200 + (ID) 1700
Total energy: -73040.0 ( -116.49 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_3GT6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GT6-query.scw
PDB file :
Tito_Scwrl_3GT6.pdb
: