Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHESRLASARLYLCTDARRERGDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVARQILAPDTLIGRSTHDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAPGL-GLVRVAAELGGDDKPWFAIGGINAQRLPAVLDAGARRIVVVRAITSADDPRAAAEQLRSALTAAN
1XI3 Chain:A ((16-210))
---------KLYVITD-RRLKPEVESVREA-LEGGATAIQMRIKNAP---------TREMYEIGKTLRQLTREYDALFFVDDRVDVALAVDADGVQLGPEDMPIEVAKEI-APNLIIGASVYSLEEALEAEKKGADYLGAGSVFPT----DARVIGLEGLRKIVESV---KIPVVAIGGINKDNAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIV----
General information:
TITO was launched using:
RESULT:
Template:
1XI3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135877 for 1651 contacts (-82.3/contact) +
2D Compatibility (PS) -21817 + (NN) -20017 + (LL) 1328
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -193233.0 ( -117.04 by residue)
QMean score : 0.671
(partial model without unconserved sides chains):
PDB file :
Tito_1XI3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XI3-query.scw
PDB file :
Tito_Scwrl_1XI3.pdb
: