Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPSYSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA
4ME3 Chain:A ((194-244))
-----------------------------------------------------------------DVQKVEIQEDP--------PQRITIITEDD--LAGLLYPGN------RVIVDGILRTEQ----------------
General information:
TITO was launched using:
RESULT:
Template:
4ME3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13131 for 190 contacts (-69.1/contact) +
2D Compatibility (PS) -4705 + (NN) -2561 + (LL) 5864
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -18833.0 ( -99.12 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_4ME3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ME3-query.scw
PDB file :
Tito_Scwrl_4ME3.pdb
: