Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTIGTRKRVAVVTGASSGIGEATARTLAAQGFHVVAVARRADRITALANQIGGTAIVA--DVTDDAAVEALARAL----SRVDVLVNNAGGAKGLQFVADADLEHWRWMWDTNVLGTLRVTRALLPKLIDSGDGLIVTVTSIAAIEVYDGGAGYTAAKHAQGALHRTLRGELLGKPVRLTEIAPGAV-ETEFSLVRFDGDQQRADAVYAGMTPLVAADVAEVIGFVATRPSHVNLDQIVIRPRDQASASRRATHPVR
3ASU Chain:A ((2-240))
---------IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG----------------------VALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSY----------
General information:
TITO was launched using:
RESULT:
Template:
3ASU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125508 for 1733 contacts (-72.4/contact) +
2D Compatibility (PS) -22327 + (NN) -6148 + (LL) 2920
1D Compatibility (HY) -14800 + (ID) 3950
Total energy: -169813.0 ( -97.99 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3ASU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASU-query.scw
PDB file :
Tito_Scwrl_3ASU.pdb
: