Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
2LRA Chain:A ((2-79))
-------------------------AMAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
General information:
TITO was launched using:
RESULT:
Template:
2LRA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10849 for 491 contacts (-22.1/contact) +
2D Compatibility (PS) -8827 + (NN) -7336 + (LL) 1820
1D Compatibility (HY) -6000 + (ID) 3850
Total energy: -35042.0 ( -71.37 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_2LRA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LRA-query.scw
PDB file :
Tito_Scwrl_2LRA.pdb
: