Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGKGRHRAGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
4XGR Chain:A ((3-132))
-VIDTSALVAMLSDEPDAERFEAAVEADHIRLMSTASYLETALVIEARFGEPGGRELDLWLHRAAVDLVAVHADQADAARAAYRTYGK----AGLNYGDCFSYGLAKISGQPLLFKGEDFQHTDIATVALP
General information:
TITO was launched using:
RESULT:
Template:
4XGR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6474 for 934 contacts (-6.9/contact) +
2D Compatibility (PS) -12640 + (NN) 2073 + (LL) 280
1D Compatibility (HY) 4000 + (ID) 750
Total energy: -13511.0 ( -14.47 by residue)
QMean score : 0.135
(partial model without unconserved sides chains):
PDB file :
Tito_4XGR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XGR-query.scw
PDB file :
Tito_Scwrl_4XGR.pdb
: