Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
4FNB Chain:A ((2-232))
MSDPVSYTRKDSIAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSGGFDLKILTSGEVQPAIDMLRGGFELAYRLLSYPKPVVMACTGHAIAMGAFLLSCGDHRVAAHAYNIQANEVAIGMTIPYAALEIMKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVVVSRAEEAAREFAGLNQHAHAATKLRSRADALTAIRAGIDGIAAEFGL
General information:
TITO was launched using:
RESULT:
Template:
4FNB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173531 for 2015 contacts (-86.1/contact) +
2D Compatibility (PS) -25802 + (NN) -12881 + (LL) 0
1D Compatibility (HY) -30400 + (ID) 11550
Total energy: -254164.0 ( -126.14 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_4FNB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FNB-query.scw
PDB file :
Tito_Scwrl_4FNB.pdb
: