Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTFDGDTSAGEAVDLTEANAFQDAAAPAEEVDPAAALKAELRSKPGDWYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGYILVRMDLTDDSWAAVRNTPGVTGFVGATSRPSALALDDVVKFLLPRGSTRKAAKGAASTAAAAEAGGLERPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
2MI6 Chain:A ((2-62)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPVVEVDYEVGESVTVMDGPFATLPATISEVNAEQQKLKVLVSIFGRETPVELTFGQVSKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2MI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26589 for 364 contacts (-73.0/contact) +
2D Compatibility (PS) -6600 + (NN) -1488 + (LL) 11148
1D Compatibility (HY) -9200 + (ID) 3050
Total energy: -35779.0 ( -98.29 by residue)
QMean score : 0.418
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