Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRGELWFA-------ATPGGDRPVLVLTRDPVADRIGAVVVVALT-RTRRGLV-SELELTAVENRVPSDCVVNFDNIHTLPRTAFRRRITRLSPARLHEACQTLRASTGC
2MF2 Chain:A ((14-124))
IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL
General information:
TITO was launched using:
RESULT:
Template:
2MF2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62969 for 726 contacts (-86.7/contact) +
2D Compatibility (PS) -10968 + (NN) -2015 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1400
Total energy: -85352.0 ( -117.56 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2MF2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MF2-query.scw
PDB file :
Tito_Scwrl_2MF2.pdb
: