Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
3W1Y Chain:C ((5-100))
----RIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLI---------DQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQI-
General information:
TITO was launched using:
RESULT:
Template:
3W1Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45016 for 570 contacts (-79.0/contact) +
2D Compatibility (PS) -9465 + (NN) -3363 + (LL) 512
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -68782.0 ( -120.67 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3W1Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W1Y-query.scw
PDB file :
Tito_Scwrl_3W1Y.pdb
: