Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
1P4S Chain:A ((1-181))
MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLLERLKGRGRADDTDDVILNRMKVYRDETAPLLEYYRDQLKTVDAVGTMDEVFARALRALGK
General information:
TITO was launched using:
RESULT:
Template:
1P4S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43296 for 1314 contacts (-32.9/contact) +
2D Compatibility (PS) -19743 + (NN) -13358 + (LL) 0
1D Compatibility (HY) -23200 + (ID) 9050
Total energy: -108647.0 ( -82.68 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1P4S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P4S-query.scw
PDB file :
Tito_Scwrl_1P4S.pdb
: