Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTMPLRGLGPPDDTGVREVSTGDDHHYAMWDAAYVLGALSAADRREFEAHLAGCPECRGAVTELCGVPALLSQLDRDEVAAISESAPTVVAS--GLSP-ELLPSLLAAVHRRRRRTRLITWVASSAAAAVLAIGVLVGVQGHSAAPQRAAVSALPMAQVGTQLLASTVSISGEPWGTFINLRCVCLAPPYASHDTLAMVVVGRDGSQTRLATWLAEPGHTATPAGSISTPVDQIAAVQVVAADTGQVLLQRSL |
| 2CH1 Chain:A ((170-238)) | -------------------------------------------------HQHDCLLIVDAVASLCGVPFY---MDKWEIDAVYTGAQ-VLGAPPGITPISISPKALDVIRNRRTKSKVFYW------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CH1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12593 for 335 contacts (-37.6/contact) +
2D Compatibility (PS) -6276 + (NN) 2391 + (LL) 12668
1D Compatibility (HY) -6400 + (ID) 1050
Total energy: -11260.0 ( -33.61 by residue)
QMean score : 0.246
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