Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQTTQSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFGNQE
2Z76 Chain:A ((6-136))
-----QSPALIASQSSWRCVQAHDREGWLALMADDVVIEDPIGKSVTNPDGSGIKGKEAVGAFFDTHIAANRLTVTCEETFPSSSPDEIAHILVLHSEFDGGFTSEVRGVFTYRVNKAGLITNMRGYWNLDMMTFG---
General information:
TITO was launched using:
RESULT:
Template:
2Z76.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67572 for 977 contacts (-69.2/contact) +
2D Compatibility (PS) -14087 + (NN) -5227 + (LL) 628
1D Compatibility (HY) -17600 + (ID) 6550
Total energy: -110408.0 ( -113.01 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2Z76.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z76-query.scw
PDB file :
Tito_Scwrl_2Z76.pdb
: