Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGAGSDATGAGGVHAAGSGDRAVAAAVERAKATAARNIPAFDDLPVPADTANLREGADLNNALLALLPLVGVWRGEGEGRGPD-GDYRFGQQIVVSHDGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRT-QSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRFVG |
2A13 Chain:A ((26-166)) | ----------------------------------------------------------------------LLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWKLESGA----PMHAESGYFR-------PRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASK---VKEISREFELVD-GKLSYVVRMSTTTNPLQPHLKAILDKL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A13.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20730 for 1196 contacts (17.3/contact) +
2D Compatibility (PS) -14458 + (NN) -4499 + (LL) 3880
1D Compatibility (HY) -10400 + (ID) 2300
Total energy: -7047.0 ( -5.89 by residue)
QMean score : 0.335
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