Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLG-DVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVP-KAADLRSALKPLLA
2L4Q Chain:A ((22-107))
------------------------------------------------LSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFK-DGQPVKRIVGAKGKAALLRE-------
General information:
TITO was launched using:
RESULT:
Template:
2L4Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36907 for 564 contacts (-65.4/contact) +
2D Compatibility (PS) -8943 + (NN) -1698 + (LL) 5296
1D Compatibility (HY) -6000 + (ID) 1600
Total energy: -49852.0 ( -88.39 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_2L4Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L4Q-query.scw
PDB file :
Tito_Scwrl_2L4Q.pdb
: