Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGRCPTVAVVGAGMSGMCVAITLL-SAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFAKN----PNWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARF--DDGRWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHTVPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWP----NPRY-----SKLARVFHRAFPCLGSLAYK-----AYSLSFET----FAVALSNPGLHRKLVG----------------AVCRASLRR-VRDPRLRRALTPDYEPMCKRLVMSGGFYRAIQRDDVELVTAG---IDHVEHRGIVTDDGVLHEVDVIVLATGFDS-HAFFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSPVGNFPLTAVAESQAEHIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAMPNTVWTTGCDSWYLNKDGIPEVWPFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA |
| 4RG4 Chain:A ((21-528)) | ---------VIGAGFGGIYAVHKLHHELGLTTVG-FDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAINFPNLPGLDTFEGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPS--IETQVEWISDTIGYAERNGVRAIEPTPEAEAEWTETCTEIANATLFTK--------------------------LFYLG----GLRNYRAVMA------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -334737 for 3626 contacts (-92.3/contact) +
2D Compatibility (PS) -47824 + (NN) -18735 + (LL) 2660
1D Compatibility (HY) -31200 + (ID) 8200
Total energy: -438036.0 ( -120.80 by residue)
QMean score : 0.441
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