Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
3DCJ Chain:A ((3-208))
--EPLRVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATM-------
General information:
TITO was launched using:
RESULT:
Template:
3DCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167806 for 1696 contacts (-98.9/contact) +
2D Compatibility (PS) -23381 + (NN) -14739 + (LL) 596
1D Compatibility (HY) -26400 + (ID) 10250
Total energy: -241980.0 ( -142.68 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3DCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DCJ-query.scw
PDB file :
Tito_Scwrl_3DCJ.pdb
: