Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI--GVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
3HZQ Chain:A ((1-93))
MLKEFKEFALKGNVLDLAIAVVMGAAFNKIICSLVENIIMPLIGKIFGSVDFAKEWSFWGIKYG--------LFIQSVIDFIIIAFALFIFVKIA-NTLMKK---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43102 for 439 contacts (-98.2/contact) +
2D Compatibility (PS) -9339 + (NN) -1894 + (LL) 996
1D Compatibility (HY) -16000 + (ID) 1950
Total energy: -71289.0 ( -162.39 by residue)
QMean score : 0.144
(partial model without unconserved sides chains):
PDB file :
Tito_3HZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HZQ-query.scw
PDB file :
Tito_Scwrl_3HZQ.pdb
: