Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTDLAFAGAAAQARMLADGALTAPMLLEVYLQRIERLDSHLRAYRVVQFDRARAEAEAAQQRLDAGERLPLLGVPIAIKDDVDIAGEVTTYGSAG-HGPAATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWCLNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPCTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDA--------TTTVPGPEGEFVAAAARQPGRLRIALSTRV----PTPLPVRCGKQELAAVHQAGALLRDLGH-DVVVRDPDY----PASTYANYLPRFFRGISDDADAQAHPDRLE--ARTR------AIAR---LGSF-----FSDRRMAALRAAEVVLSSRIQSIFDDVDVVVTPGAATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVP--WDFDGDGLPMSVQLVGRPYDEATLLALAAQIESARPWAHRRPSVS |
| 3H0M Chain:A ((12-462)) | ---------------ELLKRGEVSPKEVVESFYDRYNQTEEKVKAYITPLYGKALKQAESLKER-----ELPLFGIPIAVKDNILVEGEKTTCASKILENFVAPYDATVIERLKKAGALIVGKTNLDEFAMGSSTEYSAFFPTKNPWDLERVPGGSSGGSAASVAVLSAPVSLGSDTGGSIRQPASFCGVIGIKPTYGRVSRYGLVAFASSLDQIGVFGRRTEDVALVLEVISGWDEKDSTSAKVPVPEWSEEVKKEVKGLKIGLPKEFFEYELQPQVKEAFENFIKELEKEGFEIKEVSLPHVKYSIPTYYIIAPSEASSN-LAR-YDGVRYGYRAKEYKDIFEMYARTRDEGFGPEVKRRIMLGTFALSAGYYDAYYLKAQKVRRLITNDFLKAFEEVDVIASPTTPTLPFKFGE-RLENPIEMYLSDILTVPA----NLAGLPAISIPIAWK---DGLPVGGQLIGKHWDETTLLQIS----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3H0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -139849 for 3818 contacts (-36.6/contact) +
2D Compatibility (PS) -44296 + (NN) -15291 + (LL) 3252
1D Compatibility (HY) -22400 + (ID) 7300
Total energy: -225884.0 ( -59.16 by residue)
QMean score : 0.491
|
|
|