Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPVPSLEPPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTTNRRMALYALEAPTTAA
2QML Chain:A ((23-168))
-------------------------------------------SFRHVTMDDVDMLHSWMHEEHVIPYWKLNIPLVDYKKHLQTFLNDDHQTLMVGAINGVPMSYWESYWVKEDIIANYYPFEEHDQGIHLLIGPQEYLGQGLIYPLLLAIMQQKFQ-EPDTNTIVAEPDRRNKKMIHVFKKCGFQPVKE--------------------
General information:
TITO was launched using:
RESULT:
Template:
2QML.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84721 for 1002 contacts (-84.6/contact) +
2D Compatibility (PS) -15652 + (NN) -6576 + (LL) 3864
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -115485.0 ( -115.25 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_2QML.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QML-query.scw
PDB file :
Tito_Scwrl_2QML.pdb
: