Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEPTVARPDIDPVLKMLLDTFPVTFTAADGVEVARARLRQLKT---PPELLPELRIEERTVGYDGLTDIPVRVYWPPVVRDNLPVVVYYHGGGWSLGGLDTHDPVARAHAVGAQAIVVSVDYRLAPEHPYPAGIDDSWAALRWVGENAAELGGDPSRIAVAGDSAGGNISAVMAQLARDVGGPPLVFQLLWYPTTMADLSLP--SFTENADAPILDRDVIDAFLAWYVPGLDISDHTMLPTTLAPGNADLSGLPPAFIGTAEHDPLRDDGACYAELLTAAGVSVELSNEPTMVHGYVNFALVVPAAAEATGRGLAALKRALHA |
| 1U4N Chain:A ((3-309)) | ----------LDPVIQQVLDQL-NRMPAPDYKHLSAQQFRSQQSLFPPVKKEPVAEVREFDMDLPGRT-LKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYP---DLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDAL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194110 for 2679 contacts (-72.5/contact) +
2D Compatibility (PS) -32983 + (NN) -19712 + (LL) 360
1D Compatibility (HY) -21600 + (ID) 6800
Total energy: -274845.0 ( -102.59 by residue)
QMean score : 0.563
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