Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTPRRHCRRIAVLAAVSIAATVVAGCSSGSKPSGGPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVTKPPVS
3MH8 Chain:A ((36-231))
-----------------------------------GPLPDAKPLVEEATAQTKALKSAHMVLTVNGKIPGLSLKTLSGDLTTNPTAATGNVKLTLGGSDIDADFVVFDGILYATLTPNQWSDFGPAADIYDPAQVLNPDTGLANVLANFADAKAEGRDTINGQNTIRISGKVSAQAVNQIAPPFNATQPVPATVWIQETGDHQLAQAQLDRGSGNSVQMTLSKWGEKVQVT-----
General information:
TITO was launched using:
RESULT:
Template:
3MH8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94284 for 1548 contacts (-60.9/contact) +
2D Compatibility (PS) -21501 + (NN) -13846 + (LL) 2260
1D Compatibility (HY) -21600 + (ID) 9800
Total energy: -158771.0 ( -102.57 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_3MH8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MH8-query.scw
PDB file :
Tito_Scwrl_3MH8.pdb
: