Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALAR-AEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGFSVGTSLLEDDMIEVCRGLL---ETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
| 1V6S Chain:A ((1-389)) | -----MRTLLDLDPKGKRVLVRVDYNVPV-QDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPK-GPDPKYSLAPVGEALRAHLP-EARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGE-EKNDPELSARYARL------GEAFVLDAFGSAHRAHASVVGVARLLPAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGLKE-RFGHVSTGGGASLEFLEKGTLPGLEVLE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -285022 for 3490 contacts (-81.7/contact) +
2D Compatibility (PS) -42150 + (NN) -20156 + (LL) 948
1D Compatibility (HY) -34800 + (ID) 9750
Total energy: -390930.0 ( -112.01 by residue)
QMean score : 0.622
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