Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITATDLEVRAGARILLAPDGPDLRVQPGDRIGLVGRNGAGKTTTLRILAGEVEPYAGSVTRAGEI--GYLPQDPKVGDLDVLARDRVLSARGLDVLLTDLEKQQALMAEVADED-ERDRAIRRYGQLEERFVALGGYGAESEAGRICASLGLPERVLTQRLRTLSGGQRRRVELARILFAASESGAGNSTTLLLDEPTNHLDADSLGWLRDFLRLHTGGLVVISHNVDLVADVVNKVWFLDAVRGQVDVYNMGWQRYVDARATDEQRRIRERANAE---RKAAALRAQAAKLGAKATKAVAAQNMLRRADRMMAALDEERVADKVARIKFPTPAACGRTPLVANGLGKTYGSLEVFTGVDLAIDRGSRVVILGLNGAGKTTLLRLLAGVEQPDTGVLEPGYGLRIGYFAQEHDTLDNDATVWENVRHA----APDAGEQDLRGLLGAFMFTGPQLEQPAGTLSGGEKTRLALAGLVASTANVLLLDEPTNNLDPASREQVLDALRSYRGAVVLVTHDPGAAAALGPQRVVLLPDGTEDYWSDEYRDLIELA |
| 4FIN Chain:A ((27-500)) | -----------------------LSFFPGAKIGVLGLNGAGKSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQL-NPEHTVRESIEEA--VSEVVNALKRLDEVYALYADPDADFDKLAAEQGRLEEIIQ------LNVQLERAADALRLPD--WDAKIANLSGGERRRVALCRLLLEKPD-------MLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHDRYFLDNVAG--WILELDRGE----GIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWVRQGTK-----KGKARLARFEELNSTEYQKR--NETNELFIPPGPRLGDKVLEVSNLRKSYGDRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVDQFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGERGRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHD---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151122 for 3319 contacts (-45.5/contact) +
2D Compatibility (PS) -49115 + (NN) -19858 + (LL) 4660
1D Compatibility (HY) -26400 + (ID) 7900
Total energy: -249735.0 ( -75.24 by residue)
QMean score : 0.486
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